Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsc family reductase | HSERO_RS10795 | Not Available | Negative | 2426575 - 2426934 | 13490.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | HSERO_RS10800 | Not Available | Negative | 2427056 - 2427889 | 29713.4 |
| succinyldiaminopimelate transaminase | HSERO_RS10805 | Not Available | Negative | 2427947 - 2429158 | 44473.3 |
| methyl-accepting chemotaxis protein | HSERO_RS10810 | Not Available | Positive | 2429486 - 2431297 | 63225.6 |
| chromosome segregation protein smc | HSERO_RS10815 | Not Available | Positive | 2431540 - 2435070 | 132560.0 |
| cell division protein zipa c-terminal ftsz-binding domain-containing protein | HSERO_RS10820 | Not Available | Positive | 2435464 - 2436789 | 47418.1 |
| nad-dependent dna ligase liga | HSERO_RS10825 | Not Available | Positive | 2436813 - 2438879 | 74664.1 |
| utp--glucose-1-phosphate uridylyltransferase galu | HSERO_RS10830 | Not Available | Positive | 2438952 - 2439842 | 32316.3 |
| peptide deformylase | HSERO_RS10835 | Not Available | Positive | 2439925 - 2440461 | 20112.1 |
| cyanophycin synthetase | HSERO_RS10840 | Not Available | Negative | 2440538 - 2443111 | 91043.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


