Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | HSERO_RS10745 | Not Available | Positive | 2416063 - 2417448 | 48908.2 |
| flagellar protein flhe | HSERO_RS10750 | Not Available | Negative | 2417464 - 2418024 | 19672.4 |
| sensor histidine kinase | HSERO_RS10755 | Not Available | Negative | 2418017 - 2419378 | 50423.3 |
| two-component system response regulator ompr | HSERO_RS10760 | Not Available | Negative | 2419416 - 2420177 | 28629.5 |
| hypothetical protein | HSERO_RS10765 | Not Available | Positive | 2420397 - 2420678 | 10278.3 |
| amino acid abc transporter permease | HSERO_RS10770 | Not Available | Negative | 2420801 - 2421460 | 23853.1 |
| cystine abc transporter substrate-binding protein | HSERO_RS10775 | Not Available | Negative | 2421553 - 2422356 | 28400.2 |
| atp-binding cassette domain-containing protein | HSERO_RS10780 | Not Available | Negative | 2422494 - 2424476 | 73835.4 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | HSERO_RS10785 | Not Available | Negative | 2424525 - 2425415 | 33003.4 |
| succinyl-diaminopimelate desuccinylase | HSERO_RS10790 | Not Available | Negative | 2425445 - 2426572 | 40622.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


