Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | HSERO_RS10645 | Not Available | Negative | 2396106 - 2396744 | 23495.1 |
| yicc/yloc family endoribonuclease | HSERO_RS10650 | Not Available | Negative | 2396830 - 2397744 | 33719.8 |
| ribonuclease ph | HSERO_RS10655 | Not Available | Positive | 2398069 - 2398797 | 26037.1 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | HSERO_RS10660 | Not Available | Positive | 2398951 - 2399541 | 20771.6 |
| radical sam family heme chaperone hemw | HSERO_RS10665 | Not Available | Positive | 2399538 - 2400782 | 46021.0 |
| eal and hdod domain-containing protein | HSERO_RS10670 | Not Available | Positive | 2400925 - 2402124 | 44113.1 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | HSERO_RS10675 | Not Available | Positive | 2402130 - 2404181 | 75924.3 |
| superoxide dismutase family protein | HSERO_RS10680 | Not Available | Positive | 2404409 - 2404936 | 18159.8 |
| zinc ribbon domain-containing protein | HSERO_RS10685 | Not Available | Positive | 2404986 - 2406029 | 39714.1 |
| Trna-ser | Not Available | Not Available | Positive | 2406156 - 2406249 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


