Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | HSERO_RS10595 | Not Available | Positive | 2385340 - 2386227 | 33353.2 |
| eal and hdod domain-containing protein | HSERO_RS10600 | Not Available | Positive | 2386379 - 2387725 | 50588.5 |
| hypothetical protein | HSERO_RS10605 | Not Available | Negative | 2387815 - 2388417 | 23131.6 |
| methylglyoxal synthase | HSERO_RS10610 | Not Available | Negative | 2388425 - 2389312 | 32620.4 |
| transcription elongation factor greb | HSERO_RS10615 | Not Available | Positive | 2389529 - 2390086 | 20721.3 |
| duf3422 family protein | HSERO_RS10620 | Not Available | Positive | 2390211 - 2391551 | 49397.4 |
| fmn-dependent nadh-azoreductase | HSERO_RS10625 | Not Available | Negative | 2391653 - 2392261 | 21328.5 |
| lysr family transcriptional regulator | HSERO_RS10630 | Not Available | Positive | 2392462 - 2393436 | 35444.6 |
| rela/spot family protein | HSERO_RS10635 | Not Available | Negative | 2393546 - 2395807 | 83966.3 |
| dna-directed rna polymerase subunit omega | HSERO_RS10640 | Not Available | Negative | 2395843 - 2396046 | 7431.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


