Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf47 domain-containing protein | HSERO_RS10395 | Not Available | Positive | 2339275 - 2339901 | 23542.5 |
| inorganic phosphate transporter | HSERO_RS10400 | Not Available | Positive | 2339963 - 2340970 | 35467.3 |
| phoh family protein | HSERO_RS10405 | Not Available | Negative | 2341076 - 2342776 | 62170.6 |
| peroxiredoxin | HSERO_RS10410 | Not Available | Negative | 2343170 - 2343646 | 17726.3 |
| polysaccharide deacetylase family protein | HSERO_RS10415 | Not Available | Negative | 2343694 - 2344635 | 34814.6 |
| bifunctional udp-4-keto-pentose/udp-xylose synthase | HSERO_RS10420 | Not Available | Negative | 2344929 - 2345984 | 39740.7 |
| formyltransferase | HSERO_RS10425 | Not Available | Negative | 2346014 - 2346931 | 33417.2 |
| glycosyltransferase | HSERO_RS10430 | Not Available | Negative | 2346928 - 2347884 | 35864.6 |
| degt/dnrj/eryc1/strs family aminotransferase | HSERO_RS10435 | Not Available | Negative | 2348082 - 2349203 | 40810.3 |
| eama family transporter | HSERO_RS10440 | Not Available | Negative | 2349308 - 2349679 | 13041.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


