Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chain length determinant protein epsf | HSERO_RS09950 | Not Available | Positive | 2248576 - 2249976 | 50327.2 |
| chain length determinant protein tyrosine kinase epsg | HSERO_RS09955 | Not Available | Positive | 2250071 - 2250952 | 31865.6 |
| exosortase b | HSERO_RS09960 | Not Available | Positive | 2250975 - 2252618 | 59231.3 |
| o-antigen ligase family protein | HSERO_RS09965 | Not Available | Positive | 2252662 - 2254098 | 53808.8 |
| glycosyltransferase family 4 protein | HSERO_RS09970 | Not Available | Positive | 2254122 - 2255381 | 46000.0 |
| acyltransferase family protein | HSERO_RS09975 | Not Available | Positive | 2255378 - 2256490 | 41813.8 |
| acyltransferase family protein | HSERO_RS09980 | Not Available | Positive | 2256585 - 2258573 | 73038.5 |
| hypothetical protein | HSERO_RS09985 | Not Available | Negative | 2258652 - 2260022 | 48555.6 |
| glycosyltransferase family 2 protein | HSERO_RS09990 | Not Available | Positive | 2260300 - 2261490 | 42316.3 |
| wecb/taga/cpsf family glycosyltransferase | HSERO_RS09995 | Not Available | Positive | 2261477 - 2262694 | 44209.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


