Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | HSERO_RS09900 | Not Available | Positive | 2237851 - 2238879 | 38093.4 |
| phenylalanine--trna ligase subunit beta | HSERO_RS09905 | Not Available | Positive | 2238959 - 2241385 | 88459.2 |
| integration host factor subunit alpha | HSERO_RS09910 | Not Available | Positive | 2241450 - 2241863 | 15370.2 |
| merr family transcriptional regulator | HSERO_RS09915 | Not Available | Positive | 2241867 - 2242274 | 15594.9 |
| gnat family n-acetyltransferase | HSERO_RS09920 | Not Available | Positive | 2242439 - 2242942 | 18137.1 |
| phosphatase pap2 family protein | HSERO_RS09925 | Not Available | Negative | 2243015 - 2243641 | 22465.9 |
| xrtb/pep-cterm-associated polysaccharide biosynthesis outer membrane protein epsl | HSERO_RS09930 | Not Available | Positive | 2244077 - 2245243 | 43633.9 |
| undecaprenyl-phosphate glucose phosphotransferase | HSERO_RS09935 | Not Available | Positive | 2245254 - 2246666 | 53388.4 |
| epsd family peptidyl-prolyl cis-trans isomerase | HSERO_RS09940 | Not Available | Positive | 2246724 - 2247638 | 32848.6 |
| polysaccharide export protein epse | HSERO_RS09945 | Not Available | Positive | 2247717 - 2248511 | 28519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


