Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | HSERO_RS09850 | Not Available | Positive | 2229810 - 2230160 | 12617.1 |
| rela/spot family protein | HSERO_RS09855 | Not Available | Positive | 2230167 - 2232416 | 83739.3 |
| Trna-val | Not Available | Not Available | Positive | 2232522 - 2232598 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2232690 - 2232766 | Not Available |
| response regulator | HSERO_RS09870 | Not Available | Positive | 2233095 - 2233502 | 14776.2 |
| hypothetical protein | HSERO_RS09875 | Not Available | Negative | 2233601 - 2233795 | 7537.82 |
| threonine--trna ligase | HSERO_RS09880 | Not Available | Positive | 2234279 - 2236186 | 72140.8 |
| translation initiation factor if-3 | HSERO_RS09885 | Not Available | Positive | 2236260 - 2236781 | 19923.4 |
| 50s ribosomal protein l35 | HSERO_RS09890 | Not Available | Positive | 2237074 - 2237271 | 7422.28 |
| 50s ribosomal protein l20 | HSERO_RS09895 | Not Available | Positive | 2237297 - 2237659 | 13482.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


