Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybdd/yjix family protein | HSERO_RS09800 | Not Available | Positive | 2222132 - 2222347 | 8293.05 |
| hypothetical protein | HSERO_RS09805 | Not Available | Positive | 2222667 - 2223035 | 13313.8 |
| protease htpx | HSERO_RS09810 | Not Available | Positive | 2223188 - 2224066 | 31544.7 |
| ybal family putative k(+) efflux transporter | HSERO_RS09815 | Not Available | Positive | 2224212 - 2225852 | 57636.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | HSERO_RS09820 | Not Available | Positive | 2226203 - 2226712 | 18421.0 |
| hypothetical protein | HSERO_RS09825 | Not Available | Positive | 2226888 - 2227205 | 11388.8 |
| duf2242 domain-containing protein | HSERO_RS09830 | Not Available | Negative | 2227317 - 2227874 | 19741.1 |
| hypothetical protein | HSERO_RS25200 | Not Available | Positive | 2228248 - 2228391 | 4994.1 |
| Trna-leu | Not Available | Not Available | Positive | 2228451 - 2228537 | Not Available |
| alpha/beta fold hydrolase | HSERO_RS09845 | Not Available | Positive | 2228847 - 2229713 | 31850.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


