Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 2200985 - 2201060 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2201213 - 2201286 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2201298 - 2201373 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2201428 - 2201503 | Not Available |
| abc transporter permease | HSERO_RS09720 | Not Available | Negative | 2201625 - 2202752 | 40943.1 |
| ribosome-associated atpase/putative transporter rbba | HSERO_RS09725 | Not Available | Negative | 2202754 - 2205495 | 98958.5 |
| hlyd family secretion protein | HSERO_RS09730 | Not Available | Negative | 2205492 - 2206568 | 38764.3 |
| efflux transporter outer membrane subunit | HSERO_RS09735 | Not Available | Negative | 2206576 - 2208009 | 52547.9 |
| sensor histidine kinase | HSERO_RS09740 | Not Available | Negative | 2208252 - 2209457 | 44573.3 |
| response regulator transcription factor | HSERO_RS09745 | Not Available | Negative | 2209454 - 2210158 | 25859.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


