Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin fdxa | HSERO_RS09510 | Not Available | Negative | 2163912 - 2164250 | 12319.9 |
| replication-associated recombination protein a | HSERO_RS09515 | Not Available | Positive | 2164488 - 2165792 | 48033.9 |
| hypothetical protein | HSERO_RS09520 | Not Available | Negative | 2165796 - 2166437 | 22887.4 |
| lysr family transcriptional regulator | HSERO_RS09525 | Not Available | Positive | 2166535 - 2167482 | 34671.0 |
| anaphase-promoting protein | HSERO_RS09530 | Not Available | Negative | 2167489 - 2168112 | 22583.0 |
| serine--trna ligase | HSERO_RS09535 | Not Available | Positive | 2168302 - 2169603 | 47601.0 |
| ggdef domain-containing protein | HSERO_RS09540 | Not Available | Negative | 2169717 - 2171597 | 70251.2 |
| Trna-ser | Not Available | Not Available | Positive | 2171862 - 2171951 | Not Available |
| ggdef domain-containing protein | HSERO_RS09550 | Not Available | Positive | 2172259 - 2174016 | 65132.9 |
| laci family dna-binding transcriptional regulator | HSERO_RS09555 | Not Available | Negative | 2174025 - 2175047 | 36523.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


