Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rne/rng family ribonuclease | HSERO_RS09410 | Not Available | Negative | 2137391 - 2140579 | 114906.0 |
| rlua family pseudouridine synthase | HSERO_RS09415 | Not Available | Positive | 2141381 - 2142448 | 39432.4 |
| had-iiia family hydrolase | HSERO_RS09420 | Not Available | Positive | 2142567 - 2143226 | 24264.1 |
| rieske (2fe-2s) protein | HSERO_RS09425 | Not Available | Positive | 2143236 - 2143610 | 13327.9 |
| s49 family peptidase | HSERO_RS09430 | Not Available | Positive | 2143659 - 2144690 | 37236.6 |
| sam-dependent methyltransferase | HSERO_RS09435 | Not Available | Negative | 2144799 - 2145563 | 26996.6 |
| ppx/gppa phosphatase family protein | HSERO_RS09440 | Not Available | Positive | 2145766 - 2147223 | 53510.9 |
| fe(3+) abc transporter substrate-binding protein | HSERO_RS09445 | Not Available | Positive | 2147508 - 2148542 | 37125.3 |
| gnat family n-acetyltransferase | HSERO_RS09450 | Not Available | Negative | 2148638 - 2149780 | 43811.4 |
| nad(+) synthase | HSERO_RS09455 | Not Available | Positive | 2149901 - 2151958 | 75475.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


