Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | HSERO_RS09170 | Not Available | Negative | 2086252 - 2087565 | 46630.7 |
| lysr family transcriptional regulator | HSERO_RS09175 | Not Available | Negative | 2087868 - 2088803 | 34832.0 |
| murr/rpir family transcriptional regulator | HSERO_RS09180 | Not Available | Positive | 2089197 - 2090180 | 34962.0 |
| isoaspartyl peptidase/l-asparaginase family protein | HSERO_RS09185 | Not Available | Positive | 2090177 - 2091163 | 33715.7 |
| dipeptide abc transporter atp-binding protein | HSERO_RS09190 | Not Available | Positive | 2091189 - 2093042 | 67774.8 |
| glutathione abc transporter substrate-binding protein gsib | HSERO_RS09195 | Not Available | Positive | 2093168 - 2094739 | 58594.2 |
| glutathione abc transporter permease gsic | HSERO_RS09200 | Not Available | Positive | 2094884 - 2095804 | 33908.4 |
| glutathione abc transporter permease gsid | HSERO_RS09205 | Not Available | Positive | 2095813 - 2096745 | 33631.5 |
| p1 family peptidase | HSERO_RS09210 | Not Available | Positive | 2096750 - 2097775 | 35107.3 |
| m55 family metallopeptidase | HSERO_RS09215 | Not Available | Positive | 2097800 - 2098642 | 30109.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


