Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | HSERO_RS09125 | Not Available | Positive | 2071679 - 2073154 | 52647.0 |
| hlyd family secretion protein | HSERO_RS09130 | Not Available | Positive | 2073157 - 2074233 | 38200.9 |
| ribosome-associated atpase/putative transporter rbba | HSERO_RS09135 | Not Available | Positive | 2074230 - 2077001 | 100476.0 |
| abc transporter permease | HSERO_RS09140 | Not Available | Positive | 2077003 - 2078130 | 40721.5 |
| hypothetical protein | HSERO_RS24715 | Not Available | Positive | 2078188 - 2078355 | 5839.43 |
| dna topoisomerase iv subunit a | HSERO_RS09145 | Not Available | Negative | 2078428 - 2080743 | 83873.9 |
| lytic transglycosylase domain-containing protein | HSERO_RS09150 | Not Available | Negative | 2080779 - 2081663 | 31437.5 |
| dna topoisomerase iv subunit b | HSERO_RS09155 | Not Available | Negative | 2081665 - 2083653 | 72253.0 |
| amidase | HSERO_RS09160 | Not Available | Negative | 2083907 - 2085259 | 46224.8 |
| duf2848 domain-containing protein | HSERO_RS09165 | Not Available | Negative | 2085378 - 2086055 | 24541.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


