Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium-binding protein | HSERO_RS09020 | Not Available | Positive | 2040027 - 2047997 | 263225.0 |
| plp-dependent aminotransferase family protein | HSERO_RS09025 | Not Available | Negative | 2048027 - 2049529 | 54974.4 |
| threonine dehydratase | HSERO_RS09030 | Not Available | Positive | 2049691 - 2050746 | 36955.8 |
| lyse family translocator | HSERO_RS09035 | Not Available | Positive | 2050743 - 2051342 | 21540.5 |
| dmt family transporter | HSERO_RS09040 | Not Available | Positive | 2051384 - 2052304 | 31800.7 |
| rida family protein | HSERO_RS09045 | Not Available | Positive | 2052477 - 2052935 | 15954.4 |
| plp-dependent aminotransferase family protein | HSERO_RS09050 | Not Available | Positive | 2053026 - 2054222 | 43612.0 |
| dhcw motif cupin fold protein | HSERO_RS09055 | Not Available | Positive | 2054244 - 2054573 | 12183.5 |
| gnat family n-acetyltransferase | HSERO_RS09060 | Not Available | Negative | 2054690 - 2055187 | 18346.2 |
| duf1778 domain-containing protein | HSERO_RS09065 | Not Available | Negative | 2055138 - 2055458 | 11998.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


