Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf962 domain-containing protein | HSERO_RS08970 | Not Available | Positive | 2027881 - 2028327 | 16458.8 |
| glycine zipper 2tm domain-containing protein | HSERO_RS08975 | Not Available | Positive | 2028471 - 2028923 | 15056.1 |
| gnat family n-acetyltransferase | HSERO_RS08980 | Not Available | Negative | 2028992 - 2029582 | 22094.8 |
| fusc family protein | HSERO_RS08985 | Not Available | Negative | 2029560 - 2030084 | 18781.6 |
| molecular chaperone htpg | HSERO_RS08990 | Not Available | Negative | 2030236 - 2032146 | 72088.2 |
| tolc family protein | HSERO_RS08995 | Not Available | Positive | 2032590 - 2034233 | 59448.6 |
| ompa family protein | HSERO_RS09000 | Not Available | Positive | 2034245 - 2035018 | 27607.6 |
| hlyd family type i secretion periplasmic adaptor subunit | HSERO_RS09005 | Not Available | Positive | 2035015 - 2036388 | 49653.0 |
| hypothetical protein | HSERO_RS09010 | Not Available | Positive | 2036513 - 2038174 | 60574.4 |
| peptidase domain-containing abc transporter | HSERO_RS09015 | Not Available | Positive | 2038211 - 2039914 | 61707.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


