Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | HSERO_RS08930 | Not Available | Positive | 2022066 - 2022857 | 28835.2 |
| hypothetical protein | HSERO_RS24360 | Not Available | Negative | 2022905 - 2023102 | 7681.04 |
| helix-turn-helix domain-containing protein | HSERO_RS08935 | Not Available | Positive | 2023160 - 2023675 | 18854.3 |
| Trna-lys | Not Available | Not Available | Positive | 2023740 - 2023815 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 2023890 - 2023965 | Not Available |
| spermidine synthase | HSERO_RS08950 | Not Available | Negative | 2024158 - 2024985 | 30892.2 |
| metq/nlpa family abc transporter substrate-binding protein | HSERO_RS08955 | Not Available | Positive | 2025165 - 2025989 | 29766.9 |
| hypothetical protein | HSERO_RS25035 | Not Available | Positive | 2026128 - 2026268 | 5324.8 |
| dna-deoxyinosine glycosylase | HSERO_RS08960 | Not Available | Negative | 2026216 - 2026770 | 19993.0 |
| sdr family oxidoreductase | HSERO_RS08965 | Not Available | Positive | 2027050 - 2027799 | 25446.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


