Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit m | HSERO_RS08880 | Not Available | Positive | 2010003 - 2011493 | 54473.5 |
| nadh-quinone oxidoreductase subunit nuon | HSERO_RS08885 | Not Available | Positive | 2011652 - 2013160 | 54119.8 |
| duf2818 family protein | HSERO_RS08890 | Not Available | Positive | 2013173 - 2013487 | 11727.8 |
| nudix domain-containing protein | HSERO_RS08895 | Not Available | Positive | 2013611 - 2014186 | 21731.9 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | HSERO_RS08900 | Not Available | Negative | 2014263 - 2015939 | 60749.0 |
| acyl-coa thioesterase | HSERO_RS08905 | Not Available | Positive | 2016364 - 2016789 | 16170.3 |
| abc transporter substrate-binding protein | HSERO_RS08910 | Not Available | Positive | 2016948 - 2018099 | 41209.7 |
| branched-chain amino acid abc transporter permease | HSERO_RS08915 | Not Available | Positive | 2018270 - 2019160 | 30713.7 |
| abc transporter permease subunit | HSERO_RS08920 | Not Available | Positive | 2019165 - 2021132 | 70205.4 |
| abc transporter atp-binding protein | HSERO_RS08925 | Not Available | Positive | 2021135 - 2021863 | 25853.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


