Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acyl-d-amino-acid deacylase family protein | HSERO_RS08730 | Not Available | Positive | 1980406 - 1981896 | 53527.5 |
| rida family protein | HSERO_RS08735 | Not Available | Positive | 1981984 - 1982367 | 13635.3 |
| gntp family permease | HSERO_RS08740 | Not Available | Positive | 1982533 - 1983885 | 47053.6 |
| hypothetical protein | HSERO_RS08745 | Not Available | Negative | 1983970 - 1984503 | 20117.9 |
| 30s ribosomal protein s15 | HSERO_RS08750 | Not Available | Positive | 1984713 - 1984982 | 10021.2 |
| polyribonucleotide nucleotidyltransferase | HSERO_RS08755 | Not Available | Positive | 1985306 - 1987444 | 76151.5 |
| nad(p)/fad-dependent oxidoreductase | HSERO_RS08760 | Not Available | Positive | 1987788 - 1989080 | 46884.4 |
| duf2891 domain-containing protein | HSERO_RS08765 | Not Available | Negative | 1989168 - 1990172 | 37945.4 |
| duf979 domain-containing protein | HSERO_RS08770 | Not Available | Negative | 1990244 - 1991230 | 35307.9 |
| duf969 domain-containing protein | HSERO_RS08775 | Not Available | Negative | 1991227 - 1991952 | 25921.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


