Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--serine o-phosphatidyltransferase | HSERO_RS08680 | Not Available | Positive | 1969512 - 1970372 | 31627.9 |
| hypothetical protein | HSERO_RS08685 | Not Available | Positive | 1970540 - 1971031 | 15843.3 |
| alpha/beta fold hydrolase | HSERO_RS08690 | Not Available | Negative | 1971086 - 1971802 | 25254.4 |
| sensor domain-containing diguanylate cyclase | HSERO_RS08695 | Not Available | Negative | 1971802 - 1973310 | 57684.5 |
| hypothetical protein | HSERO_RS08700 | Not Available | Negative | 1973480 - 1973848 | 14032.0 |
| plp-dependent aminotransferase family protein | HSERO_RS08705 | Not Available | Positive | 1974023 - 1975561 | 56186.8 |
| tetratricopeptide repeat protein | HSERO_RS08710 | Not Available | Positive | 1975764 - 1977110 | 48960.1 |
| sugar kinase | HSERO_RS08715 | Not Available | Negative | 1977113 - 1978039 | 32620.7 |
| amino acid deaminase | HSERO_RS08720 | Not Available | Negative | 1978059 - 1979351 | 47190.7 |
| murr/rpir family transcriptional regulator | HSERO_RS08725 | Not Available | Positive | 1979520 - 1980404 | 31915.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


