Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase family protein | HSERO_RS08580 | Not Available | Negative | 1953120 - 1953917 | 28792.4 |
| rna methyltransferase | HSERO_RS08585 | Not Available | Positive | 1954230 - 1955057 | 29736.6 |
| pseudouridine synthase | HSERO_RS08590 | Not Available | Positive | 1955059 - 1955781 | 26771.9 |
| type ii toxin-antitoxin system rele/pare family toxin | HSERO_RS25195 | Not Available | Negative | 1955902 - 1956096 | 7312.89 |
| hypothetical protein | HSERO_RS08600 | Not Available | Negative | 1956106 - 1956306 | 7154.41 |
| hsp33 family molecular chaperone hslo | HSERO_RS08605 | Not Available | Negative | 1956412 - 1957341 | 34031.8 |
| gamma carbonic anhydrase family protein | HSERO_RS08610 | Not Available | Negative | 1957362 - 1957886 | 18540.4 |
| ferritin-like domain-containing protein | HSERO_RS08615 | Not Available | Positive | 1958023 - 1958868 | 31093.2 |
| hypothetical protein | HSERO_RS08620 | Not Available | Positive | 1958987 - 1959334 | 12092.4 |
| alpha/beta fold hydrolase | HSERO_RS08625 | Not Available | Negative | 1959449 - 1960378 | 34575.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


