Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS08485 | Not Available | Positive | 1931540 - 1931785 | 9013.77 |
| response regulator | HSERO_RS08490 | Not Available | Positive | 1931917 - 1932297 | 13587.8 |
| methyl-accepting chemotaxis protein | HSERO_RS25315 | Not Available | Positive | 1932385 - 1933521 | 41654.9 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | HSERO_RS08500 | Not Available | Positive | 1933643 - 1935895 | 83232.5 |
| methyl-accepting chemotaxis protein | HSERO_RS08505 | Not Available | Positive | 1936203 - 1937771 | 55466.6 |
| ggdef and eal domain-containing protein | HSERO_RS08510 | Not Available | Positive | 1937776 - 1939572 | 66949.8 |
| gaf domain-containing protein | HSERO_RS08515 | Not Available | Negative | 1939596 - 1940165 | 20562.6 |
| duf1289 domain-containing protein | HSERO_RS24350 | Not Available | Positive | 1940814 - 1940990 | 6798.53 |
| mfs transporter | HSERO_RS08520 | Not Available | Positive | 1941107 - 1942498 | 49275.9 |
| duf4197 domain-containing protein | HSERO_RS08525 | Not Available | Positive | 1942558 - 1943256 | 24248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


