Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | HSERO_RS08350 | Not Available | Positive | 1901916 - 1902824 | 31971.0 |
| dna oxidative demethylase alkb | HSERO_RS08355 | Not Available | Positive | 1902821 - 1903474 | 23835.6 |
| dmt family transporter | HSERO_RS08360 | Not Available | Negative | 1903428 - 1904363 | 33256.7 |
| arac family transcriptional regulator | HSERO_RS08365 | Not Available | Positive | 1904478 - 1905299 | 30238.8 |
| methyl-accepting chemotaxis protein | HSERO_RS08370 | Not Available | Positive | 1905453 - 1907105 | 58506.7 |
| d-amino acid dehydrogenase | HSERO_RS08375 | Not Available | Negative | 1907188 - 1908489 | 46503.0 |
| lrp/asnc ligand binding domain-containing protein | HSERO_RS08380 | Not Available | Positive | 1908671 - 1909159 | 18517.7 |
| fdhf/ydep family oxidoreductase | HSERO_RS08385 | Not Available | Positive | 1909337 - 1911664 | 85817.5 |
| helix-turn-helix domain-containing protein | HSERO_RS08390 | Not Available | Positive | 1911677 - 1911961 | 10152.3 |
| plp-dependent aminotransferase family protein | HSERO_RS08395 | Not Available | Negative | 1912130 - 1913572 | 53811.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


