Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase | HSERO_RS08155 | Not Available | Positive | 1862159 - 1863049 | 31968.9 |
| dmt family transporter | HSERO_RS08160 | Not Available | Positive | 1863046 - 1863945 | 31747.6 |
| helix-turn-helix transcriptional regulator | HSERO_RS08165 | Not Available | Negative | 1863961 - 1864761 | 30195.1 |
| class i sam-dependent methyltransferase | HSERO_RS08170 | Not Available | Positive | 1864892 - 1865653 | 27467.9 |
| d-alanyl-d-alanine endopeptidase | HSERO_RS08175 | Not Available | Positive | 1866084 - 1867184 | 39655.2 |
| iclr family transcriptional regulator | HSERO_RS08180 | Not Available | Negative | 1867628 - 1868413 | 28838.6 |
| sulfate abc transporter substrate-binding protein | HSERO_RS08185 | Not Available | Positive | 1868690 - 1869703 | 37065.1 |
| nadph-dependent fmn reductase | HSERO_RS08190 | Not Available | Positive | 1869765 - 1870361 | 21319.8 |
| sulfonate abc transporter substrate-binding protein | HSERO_RS08195 | Not Available | Positive | 1870471 - 1871454 | 35420.8 |
| fmnh2-dependent alkanesulfonate monooxygenase | HSERO_RS08200 | Not Available | Positive | 1871476 - 1872642 | 42038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


