Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | HSERO_RS08055 | Not Available | Positive | 1842764 - 1843117 | 12561.0 |
| duf1841 family protein | HSERO_RS08060 | Not Available | Negative | 1843189 - 1843620 | 16426.4 |
| branched-chain amino acid abc transporter substrate-binding protein | HSERO_RS08065 | Not Available | Positive | 1843830 - 1845014 | 42596.1 |
| endonuclease iii | HSERO_RS08070 | Not Available | Negative | 1845024 - 1845674 | 24375.6 |
| electron transport complex subunit rsxb | HSERO_RS08075 | Not Available | Negative | 1845671 - 1846393 | 25758.8 |
| polyhydroxyalkanoate depolymerase | HSERO_RS08080 | Not Available | Negative | 1846523 - 1847758 | 46563.6 |
| nad(p)/fad-dependent oxidoreductase | HSERO_RS08085 | Not Available | Negative | 1848043 - 1849116 | 38953.3 |
| ferredoxin fdxa | HSERO_RS08090 | Not Available | Negative | 1849404 - 1849727 | 12103.2 |
| abc transporter substrate-binding protein | HSERO_RS08095 | Not Available | Positive | 1850174 - 1851364 | 42784.0 |
| nicotinate phosphoribosyltransferase | HSERO_RS08100 | Not Available | Positive | 1851522 - 1852697 | 45370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


