Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine(46)-n(7))-methyltransferase trmb | HSERO_RS00330 | Not Available | Negative | 79879 - 80556 | 25132.9 |
| duf3567 domain-containing protein | HSERO_RS00335 | Not Available | Negative | 80685 - 80942 | 9893.64 |
| response regulator | HSERO_RS00340 | Not Available | Negative | 81374 - 82123 | 27085.5 |
| sensor histidine kinase | HSERO_RS00345 | Not Available | Negative | 82258 - 84540 | 82588.8 |
| duf4390 domain-containing protein | HSERO_RS00350 | Not Available | Negative | 84537 - 85187 | 24801.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | HSERO_RS00355 | Not Available | Negative | 85184 - 86503 | 47803.6 |
| duf1840 domain-containing protein | HSERO_RS00360 | Not Available | Negative | 86691 - 87035 | 12369.6 |
| hypothetical protein | HSERO_RS00365 | Not Available | Negative | 87206 - 87751 | 19398.3 |
| opt family oligopeptide transporter | HSERO_RS00370 | Not Available | Positive | 87886 - 89892 | 68733.0 |
| phosphatidate cytidylyltransferase | HSERO_RS00375 | Not Available | Negative | 89932 - 90873 | 34745.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


