Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase | HSERO_RS07760 | Not Available | Negative | 1777001 - 1778542 | 55549.3 |
| yqha family protein | HSERO_RS07765 | Not Available | Negative | 1778582 - 1779223 | 23438.2 |
| acetate--coa ligase | HSERO_RS07770 | Not Available | Positive | 1779611 - 1781593 | 72577.6 |
| Trna-ser | Not Available | Not Available | Positive | 1781783 - 1781873 | Not Available |
| hypothetical protein | HSERO_RS07780 | Not Available | Positive | 1782053 - 1783096 | 39856.4 |
| stas-like domain-containing protein | HSERO_RS24330 | Not Available | Positive | 1783093 - 1783422 | 12305.6 |
| hypothetical protein | HSERO_RS24695 | Not Available | Positive | 1783607 - 1783903 | 11069.2 |
| hypothetical protein | HSERO_RS24335 | Not Available | Negative | 1784400 - 1784657 | 9136.38 |
| marr family winged helix-turn-helix transcriptional regulator | HSERO_RS07800 | Not Available | Negative | 1784771 - 1785205 | 16307.8 |
| voc family protein | HSERO_RS07805 | Not Available | Positive | 1785382 - 1785927 | 20826.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


