Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | HSERO_RS07560 | Not Available | Positive | 1725944 - 1726873 | 31511.6 |
| acyl-coa dehydrogenase | HSERO_RS07565 | Not Available | Positive | 1726969 - 1728753 | 63282.8 |
| nine protein | HSERO_RS07570 | Not Available | Negative | 1728843 - 1729265 | 15060.7 |
| 30s ribosomal protein s16 | HSERO_RS07575 | Not Available | Positive | 1729579 - 1729833 | 9138.02 |
| ribosome maturation factor rimm | HSERO_RS07580 | Not Available | Positive | 1729905 - 1730519 | 22127.1 |
| trna (guanosine(37)-n1)-methyltransferase trmd | HSERO_RS07585 | Not Available | Positive | 1730604 - 1731377 | 28395.1 |
| 50s ribosomal protein l19 | HSERO_RS07590 | Not Available | Positive | 1731532 - 1731915 | 14254.2 |
| coa pyrophosphatase | HSERO_RS07595 | Not Available | Positive | 1732022 - 1732693 | 25015.8 |
| cobd/cbib family protein | HSERO_RS07600 | Not Available | Positive | 1732867 - 1733826 | 35369.9 |
| duf3579 domain-containing protein | HSERO_RS07605 | Not Available | Positive | 1734157 - 1734507 | 12762.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


