Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | HSERO_RS07410 | Not Available | Negative | 1695268 - 1696335 | 39140.2 |
| ofa family mfs transporter | HSERO_RS07415 | Not Available | Positive | 1696560 - 1698206 | 58308.6 |
| formate dehydrogenase subunit gamma | HSERO_RS07420 | Not Available | Positive | 1698724 - 1699200 | 17280.8 |
| formate dehydrogenase beta subunit | HSERO_RS07425 | Not Available | Positive | 1699200 - 1700762 | 54998.1 |
| formate dehydrogenase subunit alpha | HSERO_RS07430 | Not Available | Positive | 1700815 - 1703688 | 105224.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | HSERO_RS07435 | Not Available | Positive | 1703762 - 1704604 | 30207.8 |
| formate dehydrogenase subunit delta | HSERO_RS07440 | Not Available | Positive | 1704696 - 1704923 | 8573.4 |
| flavin reductase | HSERO_RS07445 | Not Available | Negative | 1705024 - 1705524 | 17510.2 |
| lysr family transcriptional regulator | HSERO_RS07450 | Not Available | Positive | 1705741 - 1706676 | 35084.8 |
| quinone oxidoreductase family protein | HSERO_RS07455 | Not Available | Positive | 1706765 - 1707694 | 32815.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


