Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | HSERO_RS00280 | Not Available | Negative | 69098 - 69964 | 31694.5 |
| abc transporter atp-binding protein | HSERO_RS00285 | Not Available | Negative | 69973 - 70845 | 31888.5 |
| abc transporter substrate-binding protein | HSERO_RS00290 | Not Available | Negative | 70881 - 71909 | 37172.7 |
| potassium transporter kup | HSERO_RS00295 | Not Available | Positive | 72338 - 74239 | 69442.8 |
| ornithine cyclodeaminase | HSERO_RS00300 | Not Available | Positive | 74416 - 75459 | 37620.3 |
| arginase | HSERO_RS00305 | Not Available | Positive | 75471 - 76379 | 32024.6 |
| basic amino acid abc transporter substrate-binding protein | HSERO_RS00310 | Not Available | Positive | 76570 - 77349 | 28020.9 |
| amino acid abc transporter permease | HSERO_RS00315 | Not Available | Positive | 77496 - 78248 | 27740.2 |
| amino acid abc transporter atp-binding protein | HSERO_RS00320 | Not Available | Positive | 78254 - 78976 | 26826.2 |
| dmt family transporter | HSERO_RS00325 | Not Available | Negative | 79037 - 79882 | 29839.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


