Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | HSERO_RS07305 | Not Available | Positive | 1672655 - 1675351 | 100502.0 |
| dihydrolipoyllysine-residue acetyltransferase | HSERO_RS07310 | Not Available | Positive | 1675515 - 1677179 | 56621.3 |
| dihydrolipoyl dehydrogenase | HSERO_RS07315 | Not Available | Positive | 1677210 - 1679000 | 61482.4 |
| hypothetical protein | HSERO_RS07320 | Not Available | Positive | 1679152 - 1679625 | 17291.7 |
| methyl-accepting chemotaxis protein | HSERO_RS25310 | Not Available | Negative | 1679678 - 1681306 | 58081.2 |
| mfs transporter | HSERO_RS07330 | Not Available | Negative | 1681730 - 1683028 | 46777.8 |
| substrate-binding domain-containing protein | HSERO_RS07335 | Not Available | Negative | 1683067 - 1683855 | 27476.5 |
| lysr family transcriptional regulator | HSERO_RS07340 | Not Available | Positive | 1683958 - 1684866 | 32893.8 |
| hypothetical protein | HSERO_RS24685 | Not Available | Negative | 1685176 - 1685544 | 13651.4 |
| hypothetical protein | HSERO_RS07350 | Not Available | Negative | 1685541 - 1686089 | 20040.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


