Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | HSERO_RS07250 | Not Available | Positive | 1659819 - 1660151 | 12353.7 |
| asparaginase | HSERO_RS07255 | Not Available | Negative | 1660293 - 1661363 | 38284.8 |
| ggdef domain-containing protein | HSERO_RS07260 | Not Available | Negative | 1661679 - 1662758 | 41551.5 |
| lipid a hydroxylase lpxo | HSERO_RS07265 | Not Available | Negative | 1663260 - 1664159 | 34591.9 |
| d-amino acid dehydrogenase | HSERO_RS07275 | Not Available | Negative | 1664510 - 1665820 | 47891.1 |
| hypothetical protein | HSERO_RS07280 | Not Available | Negative | 1666013 - 1666453 | 15897.8 |
| dna polymerase iii subunit chi | HSERO_RS07285 | Not Available | Negative | 1666484 - 1666903 | 15661.7 |
| m3 family metallopeptidase | HSERO_RS07290 | Not Available | Negative | 1667247 - 1669322 | 77397.4 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | HSERO_RS07295 | Not Available | Negative | 1669392 - 1670237 | 29668.2 |
| glutamate--cysteine ligase | HSERO_RS07300 | Not Available | Positive | 1670503 - 1672098 | 59545.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


