Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | HSERO_RS07205 | Not Available | Negative | 1646315 - 1647595 | 46982.1 |
| oligoribonuclease | HSERO_RS07210 | Not Available | Positive | 1647736 - 1648305 | 21535.0 |
| upf0149 family protein | HSERO_RS07215 | Not Available | Negative | 1648399 - 1649100 | 26654.4 |
| serine/threonine protein kinase | HSERO_RS07220 | Not Available | Positive | 1649226 - 1650236 | 38452.4 |
| dna-3-methyladenine glycosylase i | HSERO_RS07225 | Not Available | Positive | 1650258 - 1650827 | 21329.3 |
| hypothetical protein | HSERO_RS25020 | Not Available | Positive | 1650992 - 1652155 | 39738.8 |
| dna translocase ftsk | HSERO_RS25025 | Not Available | Positive | 1652192 - 1653976 | 64432.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | HSERO_RS07235 | Not Available | Negative | 1654093 - 1655526 | 51341.0 |
| yihy/virulence factor brkb family protein | HSERO_RS07240 | Not Available | Positive | 1655828 - 1657213 | 49815.9 |
| fdhf/ydep family oxidoreductase | HSERO_RS07245 | Not Available | Positive | 1657374 - 1659695 | 85820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


