Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | HSERO_RS07110 | Not Available | Negative | 1620138 - 1620863 | 26145.5 |
| transketolase | HSERO_RS07115 | Not Available | Positive | 1621058 - 1623058 | 71655.2 |
| gnat family n-acetyltransferase | HSERO_RS07120 | Not Available | Positive | 1623073 - 1623600 | 19013.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | HSERO_RS07125 | Not Available | Positive | 1623804 - 1624817 | 35986.8 |
| hypothetical protein | HSERO_RS07130 | Not Available | Positive | 1625055 - 1625585 | 19015.7 |
| class i sam-dependent methyltransferase | HSERO_RS07135 | Not Available | Positive | 1625766 - 1626494 | 27850.7 |
| bifunctional | HSERO_RS07140 | Not Available | Negative | 1626600 - 1629329 | 101857.0 |
| yhdp family protein | HSERO_RS07145 | Not Available | Positive | 1629631 - 1633950 | 156135.0 |
| carbon-nitrogen hydrolase family protein | HSERO_RS07150 | Not Available | Positive | 1634038 - 1634844 | 29786.8 |
| metalloprotease tldd | HSERO_RS07155 | Not Available | Positive | 1634870 - 1636330 | 51497.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


