Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | HSERO_RS07010 | Not Available | Negative | 1597387 - 1597953 | 21217.7 |
| nadp-dependent isocitrate dehydrogenase | HSERO_RS07015 | Not Available | Positive | 1598205 - 1599461 | 45783.5 |
| cold-shock protein | HSERO_RS07020 | Not Available | Negative | 1599607 - 1599813 | 7354.6 |
| atp-dependent clp protease adapter clps | HSERO_RS07025 | Not Available | Positive | 1600152 - 1600466 | 11774.3 |
| atp-dependent clp protease atp-binding subunit clpa | HSERO_RS07030 | Not Available | Positive | 1600463 - 1602766 | 84717.8 |
| m48 family metallopeptidase | HSERO_RS07035 | Not Available | Negative | 1602936 - 1604033 | 39199.2 |
| dutp diphosphatase | HSERO_RS07040 | Not Available | Negative | 1604045 - 1604494 | 15844.3 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | HSERO_RS07045 | Not Available | Negative | 1604568 - 1605764 | 42541.6 |
| signal peptidase ii | HSERO_RS07050 | Not Available | Negative | 1605796 - 1606311 | 18713.1 |
| isoleucine--trna ligase | HSERO_RS07055 | Not Available | Negative | 1606386 - 1609280 | 107594.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


