Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | HSERO_RS06960 | Not Available | Positive | 1585067 - 1585759 | 26037.7 |
| c-type cytochrome | HSERO_RS06965 | Not Available | Negative | 1585859 - 1587154 | 45861.3 |
| c-type cytochrome | HSERO_RS06970 | Not Available | Negative | 1587151 - 1587909 | 26455.7 |
| penicillin-binding protein 1a | HSERO_RS06975 | Not Available | Negative | 1588417 - 1590885 | 89772.2 |
| atp-binding cassette domain-containing protein | HSERO_RS06980 | Not Available | Positive | 1591204 - 1593126 | 71060.8 |
| sirb1 family protein | HSERO_RS06985 | Not Available | Negative | 1593142 - 1593990 | 32260.7 |
| murein biosynthesis integral membrane protein murj | HSERO_RS06990 | Not Available | Negative | 1594102 - 1595655 | 56340.0 |
| 30s ribosomal protein s20 | HSERO_RS06995 | Not Available | Positive | 1595986 - 1596252 | 9319.27 |
| duf192 domain-containing protein | HSERO_RS07000 | Not Available | Negative | 1596415 - 1596879 | 17368.3 |
| hypothetical protein | HSERO_RS25015 | Not Available | Negative | 1597026 - 1597196 | 5629.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


