Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS00230 | Not Available | Positive | 60124 - 60444 | 11309.3 |
| mfs transporter | HSERO_RS00235 | Not Available | Negative | 60729 - 62000 | 44248.5 |
| lysr family transcriptional regulator | HSERO_RS00240 | Not Available | Positive | 62188 - 63078 | 32159.0 |
| hypothetical protein | HSERO_RS00245 | Not Available | Negative | 63109 - 63564 | 16808.5 |
| feoa family protein | HSERO_RS00250 | Not Available | Positive | 64095 - 64346 | 8682.49 |
| ferrous iron transporter b | HSERO_RS00255 | Not Available | Positive | 64343 - 66169 | 65035.7 |
| duf6587 family protein | HSERO_RS00260 | Not Available | Positive | 66166 - 66453 | 10735.2 |
| threonine ammonia-lyase | HSERO_RS00265 | Not Available | Negative | 66473 - 67678 | 42338.5 |
| hypothetical protein | HSERO_RS00270 | Not Available | Positive | 68024 - 68380 | 13232.2 |
| methylated-dna--[protein]-cysteine s-methyltransferase | HSERO_RS00275 | Not Available | Positive | 68507 - 69079 | 21190.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


