Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdr/vanb family oxidoreductase | HSERO_RS06710 | Not Available | Negative | 1526061 - 1527017 | 34071.0 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | HSERO_RS06715 | Not Available | Negative | 1527073 - 1527573 | 18823.5 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HSERO_RS06720 | Not Available | Negative | 1527579 - 1528865 | 48570.5 |
| amidase family protein | HSERO_RS06725 | Not Available | Negative | 1528947 - 1530113 | 39332.1 |
| hypothetical protein | HSERO_RS25305 | Not Available | Negative | 1530110 - 1530232 | 4054.94 |
| lysr family transcriptional regulator | HSERO_RS06735 | Not Available | Positive | 1530453 - 1531382 | 34991.3 |
| porin | HSERO_RS06740 | Not Available | Negative | 1531430 - 1532488 | 36619.0 |
| pas domain-containing sensor histidine kinase | HSERO_RS06750 | Not Available | Negative | 1532813 - 1534339 | 57645.3 |
| acyl-coa dehydrogenase family protein | HSERO_RS06755 | Not Available | Positive | 1534567 - 1535727 | 40915.2 |
| hypothetical protein | HSERO_RS06760 | Not Available | Positive | 1535799 - 1536170 | 13620.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


