Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate 1,2-dioxygenase small subunit | HSERO_RS06555 | Not Available | Positive | 1491782 - 1492276 | 19508.0 |
| benzoate 1,2-dioxygenase electron transfer component benc | HSERO_RS06560 | Not Available | Positive | 1492297 - 1493352 | 36644.8 |
| benzoate diol dehydrogenase bend | HSERO_RS06565 | Not Available | Positive | 1493364 - 1494137 | 27098.5 |
| rida family protein | HSERO_RS06570 | Not Available | Positive | 1494176 - 1494592 | 14956.2 |
| mfs transporter | HSERO_RS06575 | Not Available | Positive | 1494668 - 1496035 | 48220.4 |
| benzoate/h(+) symporter bene family transporter | HSERO_RS06580 | Not Available | Positive | 1496403 - 1497572 | 40329.5 |
| gtpase | HSERO_RS06585 | Not Available | Positive | 1497591 - 1498859 | 46994.7 |
| dynamin family protein | HSERO_RS06590 | Not Available | Positive | 1498856 - 1500394 | 55559.5 |
| hypothetical protein | HSERO_RS06595 | Not Available | Positive | 1500574 - 1500987 | 14543.4 |
| duf5666 domain-containing protein | HSERO_RS06600 | Not Available | Positive | 1501173 - 1501802 | 21482.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


