Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS06505 | Not Available | Positive | 1478650 - 1479987 | 48402.5 |
| hypothetical protein | HSERO_RS06510 | Not Available | Positive | 1479980 - 1480732 | 27147.1 |
| atp-binding protein | HSERO_RS06515 | Not Available | Positive | 1480732 - 1483545 | 105923.0 |
| methyl-accepting chemotaxis protein | HSERO_RS06520 | Not Available | Negative | 1483582 - 1485288 | 61168.2 |
| 3-oxoadipate enol-lactonase | HSERO_RS06525 | Not Available | Negative | 1485791 - 1486576 | 28011.6 |
| muconolactone delta-isomerase | HSERO_RS06530 | Not Available | Negative | 1486587 - 1486874 | 10756.1 |
| lysr family transcriptional regulator | HSERO_RS06535 | Not Available | Negative | 1487007 - 1487987 | 36618.3 |
| muconate/chloromuconate family cycloisomerase | HSERO_RS06540 | Not Available | Positive | 1488133 - 1489329 | 42361.2 |
| catechol 1,2-dioxygenase | HSERO_RS06545 | Not Available | Positive | 1489376 - 1490311 | 33823.2 |
| rieske 2fe-2s domain-containing protein | HSERO_RS06550 | Not Available | Positive | 1490397 - 1491785 | 52584.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


