Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor family protein | HSERO_RS06410 | Not Available | Positive | 1446854 - 1448965 | 76660.4 |
| helix-turn-helix domain-containing protein | HSERO_RS06415 | Not Available | Negative | 1448988 - 1449962 | 36764.0 |
| hypothetical protein | HSERO_RS06420 | Not Available | Positive | 1450043 - 1450393 | 13385.4 |
| flavin monoamine oxidase family protein | HSERO_RS06425 | Not Available | Positive | 1450390 - 1451790 | 50335.8 |
| duf4440 domain-containing protein | HSERO_RS06430 | Not Available | Positive | 1451836 - 1452222 | 13886.8 |
| apc family permease | HSERO_RS06435 | Not Available | Positive | 1452150 - 1453733 | 56777.8 |
| porin | HSERO_RS06440 | Not Available | Negative | 1453771 - 1454880 | 38505.4 |
| mfs transporter | HSERO_RS06445 | Not Available | Negative | 1455076 - 1456512 | 51804.1 |
| dihydrodipicolinate synthase family protein | HSERO_RS06450 | Not Available | Negative | 1456681 - 1457598 | 33139.2 |
| lysr family transcriptional regulator | HSERO_RS06455 | Not Available | Positive | 1457801 - 1458712 | 33508.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


