Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | HSERO_RS06360 | Not Available | Positive | 1437275 - 1437871 | 21337.0 |
| duf1330 domain-containing protein | HSERO_RS06365 | Not Available | Positive | 1438085 - 1438387 | 10865.9 |
| paai family thioesterase | HSERO_RS06370 | Not Available | Positive | 1438449 - 1438994 | 19123.9 |
| coa transferase | HSERO_RS06375 | Not Available | Negative | 1439122 - 1440531 | 50313.3 |
| citrate synthase family protein | HSERO_RS06380 | Not Available | Positive | 1440635 - 1441930 | 46516.5 |
| eama family transporter | HSERO_RS06385 | Not Available | Positive | 1441983 - 1442405 | 14853.6 |
| cmcj/nvfi family oxidoreductase | HSERO_RS06390 | Not Available | Positive | 1442586 - 1443461 | 32360.1 |
| 2-hydroxychromene-2-carboxylate isomerase | HSERO_RS06395 | Not Available | Positive | 1443458 - 1444078 | 23451.0 |
| lysr family transcriptional regulator | HSERO_RS06400 | Not Available | Negative | 1444068 - 1445003 | 34185.9 |
| mfs transporter | HSERO_RS06405 | Not Available | Positive | 1445337 - 1446560 | 42414.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


