Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2325 domain-containing protein | HSERO_RS00180 | Not Available | Negative | 48219 - 48794 | 21146.4 |
| mfs transporter | HSERO_RS00185 | Not Available | Negative | 48997 - 50235 | 41692.9 |
| lysr family transcriptional regulator | HSERO_RS00190 | Not Available | Positive | 50370 - 51365 | 36297.9 |
| acetyl-coa hydrolase/transferase family protein | HSERO_RS00195 | Not Available | Negative | 51384 - 52886 | 54058.5 |
| lysr substrate-binding domain-containing protein | HSERO_RS00200 | Not Available | Positive | 53060 - 53965 | 33402.6 |
| fusc family protein | HSERO_RS00205 | Not Available | Positive | 54162 - 56297 | 76046.2 |
| mechanosensitive ion channel family protein | HSERO_RS00210 | Not Available | Positive | 56383 - 57507 | 41333.9 |
| duf4148 domain-containing protein | HSERO_RS00215 | Not Available | Negative | 57620 - 57916 | 10582.4 |
| duf4148 domain-containing protein | HSERO_RS00220 | Not Available | Negative | 58008 - 58412 | 14641.3 |
| glutamine amidotransferase | HSERO_RS00225 | Not Available | Positive | 58885 - 59634 | 28161.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


