Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate efflux transporter | HSERO_RS06210 | Not Available | Negative | 1397638 - 1398879 | 42930.8 |
| preprotein translocase subunit yajc | HSERO_RS06215 | Not Available | Positive | 1399173 - 1399451 | 10016.8 |
| protein translocase subunit secd | HSERO_RS06220 | Not Available | Positive | 1399618 - 1401522 | 68340.0 |
| protein translocase subunit secf | HSERO_RS06225 | Not Available | Positive | 1401606 - 1402550 | 34726.7 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | HSERO_RS06230 | Not Available | Positive | 1402666 - 1403523 | 30677.7 |
| dmt family transporter | HSERO_RS06235 | Not Available | Negative | 1403536 - 1404474 | 33519.7 |
| duf4337 domain-containing protein | HSERO_RS06240 | Not Available | Negative | 1404685 - 1405245 | 19942.1 |
| catalase/peroxidase hpi | HSERO_RS06245 | Not Available | Positive | 1405795 - 1408041 | 81185.4 |
| phosphonate degradation hd-domain oxygenase | HSERO_RS06250 | Not Available | Positive | 1408217 - 1408795 | 20864.6 |
| helix-turn-helix transcriptional regulator | HSERO_RS06255 | Not Available | Negative | 1408783 - 1409550 | 27908.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


