Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | HSERO_RS06020 | Not Available | Positive | 1360786 - 1361280 | 18119.4 |
| pas domain-containing sensor histidine kinase | HSERO_RS06025 | Not Available | Positive | 1361426 - 1363459 | 74898.7 |
| csbd family protein | HSERO_RS06030 | Not Available | Positive | 1363749 - 1363919 | 5963.96 |
| hypothetical protein | HSERO_RS06035 | Not Available | Positive | 1364073 - 1364450 | 13712.7 |
| osmotically-inducible lipoprotein osmb | HSERO_RS06040 | Not Available | Positive | 1364512 - 1364727 | 6670.17 |
| hypothetical protein | HSERO_RS06045 | Not Available | Negative | 1364872 - 1365204 | 11919.0 |
| duf3309 family protein | HSERO_RS24320 | Not Available | Negative | 1365361 - 1365519 | 5544.39 |
| cmpa/nrta family abc transporter substrate-binding protein | HSERO_RS06055 | Not Available | Positive | 1366062 - 1367306 | 45400.9 |
| nitrate abc transporter permease | HSERO_RS06060 | Not Available | Positive | 1367388 - 1368311 | 32900.1 |
| abc transporter atp-binding protein | HSERO_RS06065 | Not Available | Positive | 1368326 - 1369138 | 29629.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


