Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | HSERO_RS05925 | Not Available | Positive | 1345605 - 1346963 | 49646.7 |
| acyl-coa desaturase | HSERO_RS05930 | Not Available | Positive | 1347046 - 1348242 | 45912.4 |
| 50s ribosomal protein l33 | HSERO_RS05935 | Not Available | Negative | 1348557 - 1348724 | 6356.75 |
| 50s ribosomal protein l28 | HSERO_RS05940 | Not Available | Negative | 1348749 - 1348985 | 8756.73 |
| radc family protein | HSERO_RS05945 | Not Available | Negative | 1349192 - 1349866 | 24866.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | HSERO_RS05950 | Not Available | Positive | 1350062 - 1350517 | 16418.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HSERO_RS05955 | Not Available | Positive | 1350589 - 1351560 | 34740.9 |
| branched-chain amino acid abc transporter permease | HSERO_RS05960 | Not Available | Positive | 1352127 - 1353056 | 32248.2 |
| abc transporter permease subunit | HSERO_RS05965 | Not Available | Positive | 1353110 - 1354324 | 43268.1 |
| abc transporter atp-binding protein | HSERO_RS05970 | Not Available | Positive | 1354340 - 1355107 | 27809.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


