Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | HSERO_RS05825 | Not Available | Positive | 1327023 - 1327799 | 27632.7 |
| amino acid abc transporter permease | HSERO_RS05830 | Not Available | Positive | 1327900 - 1328556 | 23834.3 |
| amino acid abc transporter atp-binding protein | HSERO_RS05835 | Not Available | Positive | 1328553 - 1329281 | 26382.0 |
| nad(p)/fad-dependent oxidoreductase | HSERO_RS05840 | Not Available | Positive | 1329298 - 1330599 | 46320.6 |
| superoxide dismutase | HSERO_RS05845 | Not Available | Negative | 1330712 - 1331290 | 21381.0 |
| exodeoxyribonuclease vii large subunit | HSERO_RS05850 | Not Available | Negative | 1331609 - 1333006 | 51199.5 |
| mota/tolq/exbb proton channel family protein | HSERO_RS05855 | Not Available | Positive | 1333170 - 1333775 | 21889.1 |
| exbd/tolr family protein | HSERO_RS05860 | Not Available | Positive | 1333791 - 1334219 | 15529.9 |
| tetraacyldisaccharide 4'-kinase | HSERO_RS05865 | Not Available | Positive | 1334335 - 1335372 | 36391.3 |
| trm112 family protein | HSERO_RS05870 | Not Available | Positive | 1335353 - 1335541 | 6753.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


