Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | HSERO_RS05775 | Not Available | Positive | 1315720 - 1316688 | 34452.1 |
| marr family winged helix-turn-helix transcriptional regulator | HSERO_RS05780 | Not Available | Positive | 1316809 - 1317246 | 16557.9 |
| mfs transporter | HSERO_RS05785 | Not Available | Positive | 1317295 - 1318587 | 45971.3 |
| s1c family serine protease | HSERO_RS05790 | Not Available | Positive | 1318765 - 1320168 | 49548.0 |
| laci family dna-binding transcriptional regulator | HSERO_RS05795 | Not Available | Positive | 1320242 - 1321339 | 38915.9 |
| glucarate dehydratase | HSERO_RS05800 | Not Available | Positive | 1321543 - 1322910 | 49672.4 |
| mfs transporter | HSERO_RS05805 | Not Available | Positive | 1323022 - 1324365 | 47998.1 |
| deda family protein/thiosulfate sulfurtransferase glpe | HSERO_RS05810 | Not Available | Positive | 1324540 - 1325463 | 33554.1 |
| osmc family protein | HSERO_RS05815 | Not Available | Negative | 1325445 - 1325831 | 13876.4 |
| iclr family transcriptional regulator | HSERO_RS05820 | Not Available | Negative | 1325885 - 1326676 | 29002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


