Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | HSERO_RS05725 | Not Available | Negative | 1300814 - 1302361 | 55160.6 |
| glucarate dehydratase family protein | HSERO_RS05730 | Not Available | Negative | 1302743 - 1304017 | 46531.8 |
| mfs transporter | HSERO_RS05735 | Not Available | Negative | 1304060 - 1305388 | 47536.4 |
| gntr family transcriptional regulator | HSERO_RS05740 | Not Available | Positive | 1305596 - 1306306 | 26173.6 |
| nadp-dependent malic enzyme | HSERO_RS05745 | Not Available | Negative | 1306429 - 1308705 | 79900.2 |
| duf2076 domain-containing protein | HSERO_RS05750 | Not Available | Positive | 1309162 - 1309893 | 24435.9 |
| ketopantoate reductase family protein | HSERO_RS05755 | Not Available | Negative | 1309872 - 1310828 | 33093.6 |
| mfs transporter | HSERO_RS05760 | Not Available | Negative | 1310825 - 1312207 | 48233.8 |
| aldehyde dehydrogenase | HSERO_RS05765 | Not Available | Negative | 1312428 - 1313879 | 50042.0 |
| benzoylformate decarboxylase | HSERO_RS05770 | Not Available | Negative | 1313955 - 1315553 | 56691.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


