Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | HSERO_RS05675 | Not Available | Positive | 1289247 - 1290203 | 33768.7 |
| abc transporter permease | HSERO_RS05680 | Not Available | Positive | 1290200 - 1291081 | 30984.5 |
| abc transporter atp-binding protein | HSERO_RS05685 | Not Available | Positive | 1291086 - 1293023 | 68923.8 |
| cupin domain-containing protein | HSERO_RS05690 | Not Available | Positive | 1293254 - 1293988 | 25691.8 |
| nad(p)/fad-dependent oxidoreductase | HSERO_RS05695 | Not Available | Positive | 1293990 - 1295315 | 46950.0 |
| lysr family transcriptional regulator | HSERO_RS05700 | Not Available | Negative | 1295322 - 1296266 | 34386.4 |
| rida family protein | HSERO_RS05705 | Not Available | Positive | 1296394 - 1296810 | 14461.1 |
| aldehyde dehydrogenase family protein | HSERO_RS05710 | Not Available | Positive | 1296866 - 1298326 | 51504.9 |
| m20 aminoacylase family protein | HSERO_RS05715 | Not Available | Positive | 1298364 - 1299575 | 43954.4 |
| dsd1 family plp-dependent enzyme | HSERO_RS05720 | Not Available | Negative | 1299562 - 1300692 | 40360.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


